![]() The number in white, 2 in this case, is the minimization that lead to the minimal value of the criterion among all repetitions. Numbers represent the repetition number of the minimization and the size of the bubbles the final value of the minimized criterion. Among them, the EstimatedVSinit.pdf file contains the following figures:įigure 1: plots of estimated vs initial values of parameters ExtinctionCoeff and RUE. Ĭomplementary graphs and data are stored in the folder which path is given in optim_options$path_results. # Install and load the needed libraries if ( ! require ( "CroptimizR" ) ) # DEFINE THE PATH TO THE LOCALLY INSTALLED VERSION OF APSIM (should be something like C:/path/to/apsimx/bin/Models.exe on windows, and /usr/local/bin/Models on linux) apsimx_path <- "D:\\Home\\sbuis\\Documents\\OUTILS\\APSIM2021.\\Bin\\Models.exe"
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